BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H08LP1|AL430308
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1685 1749 0.0
>3x_Contig1685
Length = 14400
Score = 1749 bits (877), Expect = 0.0
Identities = 903/915 (98%), Gaps = 2/915 (0%)
Strand = Plus / Minus
Query: 1 gatcaatagcaacttaccaccttctcatnggagagtcgtagtatacagtaccaaagatcc 60
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 4471 gatcaatagcaacttaccaccttctc-ttggagagtcgtagtatacagtaccaaagatcc 4413
Query: 61 acacggagagcaaaccaccgaaacctccaccaatgatttcccaagctgtgaggaagtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4412 acacggagagcaaaccaccgaaacctccaccaatgatttcccaagctgtgaggaagtcaa 4353
Query: 121 acttggatgaaagaccaagcatgaggattggaacaacactcgaagaaagtwaatcgacga 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4352 acttggatgaaagaccaagcatgaggattggaacaacactcgaagaaagtaaatcgacga 4293
Query: 181 tcaagtaaatagtcaaaacatcatctgcgattaacccaacgacgaccactggaaccataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4292 tcaagtaaatagtcaaaacatcatctgcgattaacccaacgacgaccactggaaccataa 4233
Query: 241 taaggacgacgataccacgaatccagatgataggdagtttatttctganaatatcattgg 300
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 4232 taaggacgacgataccacgaatccagatgataggaagtttatttctgaaaatatcattgg 4173
Query: 301 aaattgttgataccaatgcactttggagggaatccaaagtacatgtcgataacatgacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4172 aaattgttgataccaatgcactttggagggaatccaaagtacatgtcgataacatgacaa 4113
Query: 361 cgaatgctaacacaaacccgattacccaaccaggcatttgcgtaas-rcaatgaaaaatg 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4112 cgaatgctaacacaaacccgattacccaaccaggcatttgcgtaagcacaatgaaaaatg 4053
Query: 420 cagcaccagagttttcttggtccgcgacaggcatataaccagcccagacagcaatcatac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4052 cagcaccagagttttcttggtccgcgacaggcatataaccagcccagacagcaatcatac 3993
Query: 480 cggtaacaccaatgacggtaacgaatacagcgagaatgaccgcagcgatactacaaccta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3992 cggtaacaccaatgacggtaacgaatacagcgagaatgaccgcagcgatactacaaccta 3933
Query: 540 tcattaaatctttgtcagtacgagcagcaaaagtacgcaaccagaatccagacatgaaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3932 tcattaaatctttgtcagtacgagcagcaaaagtacgcaaccagaatccagacatgaaga 3873
Query: 600 ratcgttagtgaagatggcaacagtcaagatatagactaattgccaacctaatgtgctgg 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3872 aatcgttagtgaagatggcaacagtcaagatatagactaattgccaacctaatgtgctgg 3813
Query: 660 ctttcaataaaccggattctgcaatcaaacttttatcgatgtgcacataagatcccatgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3812 ctttcaataaaccggattctgcaatcaaacttttatcgatgtgcacataagatcccatgg 3753
Query: 720 cacaagagacaataatcaaaaggatgaaaacgatactgacttggatggtatctgtgatga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3752 cacaagagacaataatcaaaaggatgaaaacgatactgacttggatggtatctgtgatga 3693
Query: 780 atgawatgtggaamccgccaattgatgtataaattgtcgtcacaacacattccacgatga 839
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3692 atgaaatgtggaacccgccaattgatgtataaattgtcgtcacaacacattccacgatga 3633
Query: 840 tgactggcaatgctttgattttggttaaactttcaatagcgtacttcaaagamgctaatt 899
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3632 tgactggcaatgctttgattttggttaaactttcaatagcgtacttcaaagacgctaatt 3573
Query: 900 cactgaccataaaca 914
|||||||||||||||
Sbjct: 3572 cactgaccataaaca 3558
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5474
Number of Sequences: 1807
Number of extensions: 5474
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)